BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016F09SP1|AL427048
(947 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1741 1875 0.0
3x_Contig1272 143 7e-34
3x_Contig1663 113 6e-25
3x_Contig1557 113 6e-25
3x_Contig1518 113 6e-25
3x_Contig1446 113 6e-25
3x_Contig1428 113 6e-25
3x_Contig1374 113 6e-25
3x_Contig1521 111 2e-24
>3x_Contig1741
Length = 21706
Score = 1875 bits (945), Expect = 0.0
Identities = 946/947 (99%)
Strand = Plus / Minus
Query: 1 atccaagggaaacactgaattgaaggaaagatattatttacagtaacttagtagaagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9456 atccaagggaaacactgaattgaaggaaagatattatttacagtaacttagtagaagtta 9397
Query: 61 ccctttcgtggggaagtgagttcagtcctattgagatatctaaaattagtaatccgatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9396 ccctttcgtggggaagtgagttcagtcctattgagatatctaaaattagtaatccgatat 9337
Query: 121 agtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgactcccggtatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9336 agtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgactcccggtatc 9277
Query: 181 ggagaaaaaattatcctttttttattatcacttttgcatgttataatatgtagctcggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9276 ggagaaaaaattatcctttttttattatcacttttgcatgttataatatgtagctcggga 9217
Query: 241 ctgttcatatggtgctgtcatgattgtgtgtaaaacccagtcatctcactttaaatttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9216 ctgttcatatggtgctgtcatgattgtgtgtaaaacccagtcatctcactttaaatttct 9157
Query: 301 cattataatatattctgttttttccattaatggaaataaatcccacttaacacccataca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9156 cattataatatattctgttttttccattaatggaaataaatcccacttaacacccataca 9097
Query: 361 ctacacccatattgacagttctgccctgagatacgcataaattatattgtatttctaccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9096 ctacacccatattgacagttctgccctgagatacgcataaattatattgtatttctaccg 9037
Query: 421 agcttgacaacactttttggggccggtggtagttgaaacccgtgctatgggatattctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9036 agcttgacaacactttttggggccggtggtagttgaaacccgtgctatgggatattctga 8977
Query: 481 cgattggcaacacgtagctgttcctgttttaagtgttttagtgtctcttacatctatggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8976 cgattggcaacacgtagctgttcctgttttaagtgttttagtgtctcttacatctatggc 8917
Query: 541 gttgtcttgtacatcttcttctgtgtaaacttaccctcccttgttgtcgtttttggatca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8916 gttgtcttgtacatcttcttctgtgtaaacttaccctcccttgttgtcgtttttggatca 8857
Query: 601 acaaaacttcaaatcttgttcagttttccagattttctgaattttcaccgaataatattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8856 acaaaacttcaaatcttgttcagttttccagattttctgaattttcaccgaataatattt 8797
Query: 661 ttcactggaaaactagctagatttcaataagatattgaacgtttaattatacaacacgta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8796 ttcactggaaaactagctagatttcaataagatattgaacgtttaattatacaacacgta 8737
Query: 721 tttattgataagttgtagttaggttgtttgttgaggttcaattgcttgttgttgcgattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8736 tttattgataagttgtagttaggttgtttgttgaggttcaattgcttgttgttgcgattt 8677
Query: 781 tgctatagatccacatatacacatcatacctaactagcaatgtctgacgctgttatttct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8676 tgctatagatccacatatacacatcatacctaactagcaatgtctgacgctgttatttct 8617
Query: 841 tacgcctctttgatcttggctgatgccggtttggatgtcactgccgacaacttgttgact 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8616 tacgcctctttgatcttggctgatgccggtttggatgtcactgccgacaacttgttgact 8557
Query: 901 ttgaccaaggctgccggtgcctctatcgacaacgtgtgggstgaaac 947
|||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 8556 ttgaccaaggctgccggtgcctctatcgacaacgtgtgggctgaaac 8510
>3x_Contig1272
Length = 8315
Score = 143 bits (72), Expect = 7e-34
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 113 tccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgactc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5215 tccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgactc 5156
Query: 173 ccggtatcggag 184
||||||||||||
Sbjct: 5155 ccggtatcggag 5144
>3x_Contig1663
Length = 13533
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 112 atccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgact 171
||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 856 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 915
Query: 172 cccggtatcggag 184
||| |||||||||
Sbjct: 916 ccccgtatcggag 928
>3x_Contig1557
Length = 10562
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 112 atccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgact 171
||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 2541 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 2600
Query: 172 cccggtatcggag 184
||| |||||||||
Sbjct: 2601 ccccgtatcggag 2613
>3x_Contig1518
Length = 11021
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 112 atccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgact 171
||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 5818 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 5759
Query: 172 cccggtatcggag 184
||| |||||||||
Sbjct: 5758 ccccgtatcggag 5746
>3x_Contig1446
Length = 10598
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 112 atccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgact 171
||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 3305 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 3246
Query: 172 cccggtatcggag 184
||| |||||||||
Sbjct: 3245 ccccgtatcggag 3233
>3x_Contig1428
Length = 9146
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 112 atccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgact 171
||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 6455 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 6396
Query: 172 cccggtatcggag 184
||| |||||||||
Sbjct: 6395 ccccgtatcggag 6383
>3x_Contig1374
Length = 8985
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 112 atccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgact 171
||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 8891 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 8832
Query: 172 cccggtatcggag 184
||| |||||||||
Sbjct: 8831 ccccgtatcggag 8819
>3x_Contig1521
Length = 8057
Score = 111 bits (56), Expect = 2e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 113 tccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgactc 172
|||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||
Sbjct: 4296 tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 4237
Query: 173 ccggtatcggag 184
|| |||||||||
Sbjct: 4236 cccgtatcggag 4225
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7379
Number of Sequences: 1807
Number of extensions: 7379
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 9
length of query: 947
length of database: 10,358,551
effective HSP length: 16
effective length of query: 931
effective length of database: 10,329,639
effective search space: 9616893909
effective search space used: 9616893909
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)